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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UVM rs35884213 chr12:9812401 G/A 0.000112 67 27.62 21.8 7.6 KM Plot
UVM rs35920072 chr15:40870109 A/G 0.000227 67 27.87 26.12 16.78 KM Plot
UVM rs36094699 chr15:40963121 T/C 1.93E-5 65 27.23 26.12 17.07 KM Plot
UVM rs371365007 chr12:9567279 C/T 0.000174 65 27.62 22.98 7.6 KM Plot
UVM rs373507147 chr12:9599179 T/C 0.000142 65 27.87 23.63 7.6 KM Plot
UVM rs3743146 chr15:40850049 A/G 0.000214 67 27.88 24.87 16.78 KM Plot
UVM rs3751557 chr15:29410238 A/G 7.26E-5 67 25.77 41.87 7.6 KM Plot
UVM rs3751558 chr15:29412402 G/T 7.26E-5 67 25.77 41.87 7.6 KM Plot
UVM rs3765654 chr1:74709711 C/G 0.000407 67 6.77 26.13 27.92 KM Plot
UVM rs3797 chr15:29412566 A/G 7.26E-5 67 25.77 41.87 7.6 KM Plot
UVM rs3803353 chr15:40857240 G/A 0.000227 67 27.87 26.12 16.78 KM Plot
UVM rs3812919 chr15:29414884 C/T 0.000116 64 25.32 41.87 7.6 KM Plot
UVM rs3882941 chr12:9599813 A/G 0.000142 66 7.6 23.63 27.62 KM Plot
UVM rs3948117 chr2:239024180 C/T 4.67E-5 67 1.18 24.6 27.37 KM Plot
UVM rs41293108 chr20:30414560 C/G 6.07E-5 67 27.9 14.23 7.6 KM Plot